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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926135.1_cds_XP_016474216.1_66265
CDS Infomation

[gene=LOC107796017] [db_xref=GeneID:107796017] [protein=lysosomal Pro-X carboxypeptidase-like] [protein_id=XP_016474216.1] [location=complement(join(47832..47962,48090..48139,48532..48611,48716..48868,49453..49608,50366..50489,50597..50709,52647..52780,53532..53712,54405..54776))] [gbkey=CDS]
Sequence

ATGGCTTTTTCTTCTTCTTATTTTTCTTTCATTTTCTTGATTTTACTGTTAATTATCTCT
TTTGCAGCTGGAGAAATTAAGCCAGTTTATCTACCAGGAACTTATCAATCTTCATTAAAG
AAACAACATGTCAAGTCAAAAATACCATTTAAAGCCCATTACTTCCCTCAAATTCTTGAC
CATTTCACTTTTCTACCAAAGAGTTCCAAAGTTTTTAAACAGAAATATCTCATAAATGAC
AAATATTGGCAAAAAGGAGGCCCTATATTTGTCTACACTGGAAATGAAGGAAATATTGAT
TGGTTTGCTGCAAACACTGGATTTATGCTTGATATTGCTCCTAAGTTCCATGCTCTTCTA
GTCTTCATTGAACATAGGTTTTATGGAAATTCAATGCCATTTGGAAAGAAATCTTACAAG
TCACCAAAGACTTTGGGATACTTGAATTCACAGCAAGCATTGGCTGATTATGCTGTTCTA
ATAAGGAGTTTGAAGCAGAATCTTTCTTCTGAATCATCACCAGTTGTGGCTTTTGGTGGC
TCTTATGGAGGAATGTTGGCTTCTTGGTTTAGACTGAAGTACCCACATATAGCCATAGGT
GCAGTGGCATCTTCAGCACCAATCTTGCAGTTTGACAAAATTACTCCTTGGTCAAGCTTT
TATGATGCTGTTTCCCAAGATTTCAAGGAGTCAAGCTTGAATTGCTATGAGGTGATAAAA
GGGAGTTGGACAGAGTTGAATGCTTTATCAAAACATGAAGAAGGCTTGACTAAAGTTAGT
ACACTTTTCAGAACTTGCAAGGGTTTGCATTCAGTTTATTCAGCTAGGGATTGGCTATGG
GAAGCTTTTGTATACACAGCAATGGTAAATTATCCAACTGAAGCCAACTTTATGATGCCA
TTGCCAGCATATCCAGTAAAAGAGATGTGCAGGATAATTGATGGATTCCCAAAAGGAGCT
TCCAAAATCAGCCGGGCATTTGCTGCTGCAAGTTTATATTACAATTATACACAAACAGAA
AAATGTTTCAATTTAGAAGGTGGTAATGATGCTCATGGACTTCATGGTTGGGACTGGCAG
GCATGTACAGAAATGGTTATGCCAATGACTTGTTCAAATGAAAGCATGTTTCCTCCGTCT
TCCTATAGTTACAAGGAATTCAAAGAAGATTGCAAGAAGAAATATGGAGTAGAGCCTCGA
CCACATTGGATCACTACTGAATTTGGTGGCTATAGAATTGAGCAAGTTCTCAAGAGATTT
GGCAGTAACATGATATTCTCTAACGGAATGCAAGATCCATGGAGCAGAGGAGGTGTGTTG
AAAAATATATCAGCTAGCATTGTGGCACTCGTAACTCAGAAAGGTGCACACCATGTTGAC
TTTCGCTCAGAGACAAAGAATGACCCTGACTGGCTGATCATGCAAAGGAAGCAAGAAATG
GCTATTATACAAAAGTGGTTAGAAGAGTACTACATAGATCTCAAAGAAAATTAG

Peptide Sequence

PEP ID

XP_016474216.1
PEP Infomation

PREDICTED: lysosomal Pro-X carboxypeptidase-like [Nicotiana tabacum]
Sequence

MAFSSSYFSFIFLILLLIISFAAGEIKPVYLPGTYQSSLKKQHVKSKIPFKAHYFPQILD
HFTFLPKSSKVFKQKYLINDKYWQKGGPIFVYTGNEGNIDWFAANTGFMLDIAPKFHALL
VFIEHRFYGNSMPFGKKSYKSPKTLGYLNSQQALADYAVLIRSLKQNLSSESSPVVAFGG
SYGGMLASWFRLKYPHIAIGAVASSAPILQFDKITPWSSFYDAVSQDFKESSLNCYEVIK
GSWTELNALSKHEEGLTKVSTLFRTCKGLHSVYSARDWLWEAFVYTAMVNYPTEANFMMP
LPAYPVKEMCRIIDGFPKGASKISRAFAAASLYYNYTQTEKCFNLEGGNDAHGLHGWDWQ
ACTEMVMPMTCSNESMFPPSSYSYKEFKEDCKKKYGVEPRPHWITTEFGGYRIEQVLKRF
GSNMIFSNGMQDPWSRGGVLKNISASIVALVTQKGAHHVDFRSETKNDPDWLIMQRKQEM
AIIQKWLEEYYIDLKEN

Transcript Sequence

Gene sequence data has not been registered.